PREVALENCE OF POTATO BLACKLEG AND SOFT ROT IN GEORGIA
DOI:
https://doi.org/10.71336/jabs.1096Keywords:
Potato, bacterial disease, soft rot, Dickeya solaniAbstract
Potato is an important crop in Georgia, but the average yields are considerably low (12 t/ha). One of the significant reasons for this is bacterial diseases. During 2020-2021, 73 samples of diseased potato tubers and stems were collected from fields and storage facilities, in different locations in Georgia. Following microbiological and biochemical tests, 54 strains (70%) were gram-negative, facultative anaerobic, oxidase negative, and catalase-positive, they developed at 37oC and in 5% NaCl, non-fluorescent on King´s B medium, and produced cavities on Crystal Violet Pectate (CVP) media, thus indicating they were either Dickeya or Pectobacterium spp. 27 out of selected 33 strains were identified as Dickeya spp. using conventional PCR and 21 of them were further characterized as D. solani (using TaqMan RT-PCR). According to the present research, D. solani is the major pathogen associated with potato soft rot and black leg in different regions of Georgia. The most prevalent species in Europe, P. brasiliense, as well as D. dianthicola have not been detected in the current research.
References
Kelsey, F., Andersen, O., Buddenhagen, C. E., Forbes, G. A., Andrade-Piedra, J. L., Mdivani, R., Fulton, J. C., Gatto, M., Khidesheli, Z., Xing, Y., Garrett, K. A. (2021): An integrated seed health strategy and phytosanitary risk assessment: Potato in the Republic of Georgia. Agricultural Systems 191:103144. DOI: 10.1016/j.agsy.2021.103144. DOI: https://doi.org/10.1016/j.agsy.2021.103144
Tsror (Lahkim), L., Erlich, O., Lebiush, S., Hazanovsky, M., Zig, U., Sławiak, M., Grabe, G., van der Wolf, J.M., van de Haar, J.J. (2009): Assessment of recent outbreaks of Dickeya spp. (syn. Erwinia chrysanthemi) slow wilt in potato crops in Israel. European Journal of Plant Pathology 123:311-320. DOI: https://doi:10.1007/s10658-008-9368-0. DOI: https://doi.org/10.1007/s10658-008-9368-0
Rosenzweig, N., Steere, L., Hammerschmidt, R., Kirk, W. (2016): Tuber soft rot, blackleg and aerial stem rot. Extension Bulletin E3335: 1–4
Toth, I.K., van der Wolf, J.M., Saddler, G., Lojkowska, E., Helias, V., Pirhonen, M., Tsror (Lahkim), L., Elphinstone, J.G. (2011): Dickeya species: an emerging problem for potato production in Europe. Plant Pathology 60 (3):385–399. DOI: https://doi.org/10.1111/j.1365-3059. 2011.02427. DOI: https://doi.org/10.1111/j.1365-3059.2011.02427.x
Tsror (Lahkim), L., Erlich, O., Lebiush, S., van der Wolf, J., Czajkowski, R., Mozes, G., Sikharulidze, Z., Ben Daniel, B. (2011): First Report of Potato Blackleg caused by Dickeya spp. in Georgia. New Disease Reports 23, 1. DOI: https://doi.org/10.5197/j.2044-0588.2011.023.001
Tsror (Lahkim), L., Erlich, O., Hazanovsky, M., Ben-Daniel, B., Zig, U., Lebiush, S. (2012): Detection of Dickeya spp. latent infection in potato seed tubers using PCR or ELISA and correlation with disease incidence in commercial field crops under hot‐climate conditions. Plant Pathology 61(1):161– 168. https://doi.org/10.1111/j.1365-3059.2011.02492.x. DOI: https://doi.org/10.1111/j.1365-3059.2011.02492.x
Hyman, L.J., Sullivan, L., Toth, I.K., Perombelon, C.M. (2001): Modified crystal violet pectate medium (CVP) based on a new polypectate source (Slendid) for the detection and isolation of soft rot erwinias. European Potato Journal 44(3):265-270. DOI: 10.1007/BF02357904. DOI: https://doi.org/10.1007/BF02357904
Pérombelon, M.C.M., Van Der Wolf, J. M. (2002): Methods for the detection and quantification of Erwinia carotovora subsp. atroseptica (Pectobacterium carotovorum subsp. atrosepticum) on potatoes: a laboratory manual. Scottish Crop Research Institute Annual Report. No. 10.
Schaad, N. W., Jones, J.B., Chun, W. (2001): Laboratory guide for identification of plant pathogenic bacteria. 3rd eddition, American Phytopathological Society Press, St. Paul, Minnesota.
Dadaşoğlu, F., Kotan, R. (2017): Identification and characterization of Pectobacterium carotovorum. Journal of Animal Plant Sciences 27 (2): 647-654.
Darrasse, A., Priou, S., Kotoujansky, A., Bertheau, Y. (1994): PCR and restriction fragment length polymorphism of a pel gene as a tool to identify Erwinia carotovora about potato diseases. Applied and Environmental Microbiology 60 (5): 1437– 1443. DOI:https://doi: 10.1128/aem.60.5.1437-1443.1994. DOI: https://doi.org/10.1128/aem.60.5.1437-1443.1994
Duarte, V., De Boer, S.H., Ward, L. J., De Oliveira, A.M.R. (2004): Characterization of atypical Erwinia carotovora strains causing blackleg of potato in Brazil. Journal of Applied Microbiology 96:535–545. DOI:https://doi.org/10.1111/j.1365-2672.2004.02173. DOI: https://doi.org/10.1111/j.1365-2672.2004.02173.x
Nassar, A., Darrasse, A., Lemattre, M., Kotoujansky, A., Dervin, C., Vedel, R., Bertheau, Y. (1996): Characterization of Erwinia chrysanthemi by pectinolytic isozyme polymorphism and restriction fragment length polymorphism analysis of PCR-amplified fragments of pel genes. Applied and Environmental Microbiology 62(7): 2228-2235. DOI: https://doi.org/10.1128/aem.62.7.2228-2235.1996
Pritchard, L., Humphris, S., Saddler, G.S., Parkinson, N.M., Bertrand, V., Elphinstone, J.G., Toth, I.K. (2012): Detection of phytopathogens of the genus Dickeya using a PCR primer prediction pipeline for draft bacterial genome sequences. Plant Pathology 62 (3): 587– 596. DOI: https://doi.org/10.1111/j.1365-3059.2012.02678.x
van der Wolf, J. M., de Haas, B.H., van Hoof, R., de Haan, E.G., van den Bovenkamp, G.W. (2014): Development and evaluation of TaqMan assays for the differentiation of Dickeya (sub)species. European Journal of Plant Pathology 138 (4): 695–709. DOI: https://doi.org/10.1007/s10658-013-0343-z
Czajkowski, R., Pérombelon, M.C.M., Jafra, S., Łojkowska, E., Potrykus, M., van der Wolf, J. M., Śledź, W. (2014): Detection, identification, and differentiation of Pectobacterium and Dickeya species causing potato blackleg and tuber soft rot: a review. Annals of Applied Biology 166 (1):18-38. https://doi.org/10.1111/aab.12166. DOI: https://doi.org/10.1111/aab.12166
Muradashvili, M.T., Meparishvili, G.V., Tediashvili, M.I., Sikharulidze, Z. V. (2015): Phenotypic Properties of Georgian isolates of Ralstonia solanacearum. Annals of Agrarian Science 13(3):20-25.
Tsror (Lahkim), L., Hélias, V., Mordechai-Lebiush, S., Erlich, O., Hazanovsky, M., Chalupowicz, L., Reuven, M., Dror, O., Valinsky, L., Lourent, A. Manulis-Sasson, S. (2021): Characterization of Pectobacterium brasiliense strains from potato and vegetables in Israel. Plant Pathology 70 (9):2179-2187. DOI:10.1111/ppa.13454. DOI: https://doi.org/10.1111/ppa.13454
Waleron, M., Waleron, K., Lojkowska, E. (2014): Characterization of Pectobacterium carotovorum subsp. odoriferum causing soft rot of stored vegetables. European Journal of Plant Pathology 139: 457-469. DOI: https://doi.org/10.1007/s10658-014-0403-z
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